226 entries · Source repositories

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mesa/mesa

Mesa is an open-source Python library for agent-based modeling, ideal for simulating complex systems and exploring emergent behaviors.

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GitHub · mesa/mesaStars 3.9KForks 1.3K

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MesserLab/SLiM

SLiM is a genetically explicit forward simulation software package for population genetics and evolutionary biology. It is highly flexible, with a built-in scripting language, and has a cross-platform graphical modeling environment called SLiMgui.

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GitHub · MesserLab/SLiMStars 233Forks 38

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mfem/mfem

Lightweight, general, scalable C++ library for finite element methods

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GitHub · mfem/mfemStars 2.2KForks 652

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mggg/GerryChain

Use MCMC to analyze districting plans and gerrymanders

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GitHub · mggg/GerryChainStars 155Forks 77

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mie-lab/trackintel

trackintel is a framework for spatio-temporal analysis of movement trajectory and mobility data.

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GitHub · mie-lab/trackintelStars 268Forks 58

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mikolmogorov/Flye

De novo assembler for single molecule sequencing reads using repeat graphs

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GitHub · mikolmogorov/FlyeStars 950Forks 187

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mne-tools/mne-python

MNE: Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python

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GitHub · mne-tools/mne-pythonStars 3.5KForks 1.6K

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modflowpy/flopy

A Python package to create, run, and post-process MODFLOW-based models.

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GitHub · modflowpy/flopyStars 631Forks 362

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