Capability details
What this helps you do
Single-cell analysis in Python. Scales to >100M cells.
From the source repository
View description sources
Research classification
Computer and information sciences · Biological sciences
Single-cell analysis · Bioinformatics · Data analysis
View discipline evidence
editor · 2026-09-16 — 计算生物信息方法与细胞/基因表达研究对象分别支持 1.2、1.6；未据生物数据推断临床医学。
View research tag evidence
editor · 2026-09-16 — Editorial method/task/topic tags for this entry; not a discipline or a maintainer endorsement.
Who it is for
An intended audience has not been supplied. Check the original documentation for suitability and prerequisites.
How to use it
Follow upstream guidance and source conditions.
AIPOCH has not verified execution.
Read usage documentationInputs
Not described in the catalog.
Outputs
Not described in the catalog.
Resource type
Tool
Execution guidance
Follow the upstream documentation. Execution has not been verified by AIPOCH.
Access conditions
Check the original documentation and license for applicable conditions.
Sources & versions
- Reference role
- primary
- Last successful public check
- 2026-09-22T08:37:54.212Z
- Latest public check attempt
- 2026-09-22T08:37:54.212Z · ok
- GitHub metrics
- Stars 2,563 · checked · latest attempt 2026-09-22T08:37:54.212Z (ok)
Forks 780 · checked · latest attempt 2026-09-22T08:37:54.212Z (ok) - Latest default-branch commit
0d5fd16234865619d2f5097d33fc4281900a2bc2
Observed 2026-09-22T08:37:54.212Z- Source activity check
- fresh · last successful check 2026-09-22T08:37:54.212Z · latest attempt 2026-09-22T08:37:54.212Z (ok)
- Source status
- Active at last observation
- License
- BSD-3-Clause
- Fixed commit
0d5fd16234865619d2f5097d33fc4281900a2bc2- Reference checked
- 2026-09-22
Default-branch activity is separate from the fixed reference above. Source terms apply. A fixed commit identifies content; it does not establish scientific validity.
Related research
Single-cell analysis software. This catalog connects the Scanpy implementation with the AnnData data model that its README identifies as jointly developed infrastructure.
Relationship: uses · AnnData research software
github evidence · 2026-09-12 — Scanpy README states that the toolkit is built jointly with AnnData. This is a software relationship, not scientific validation.
Claims & evidence
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Research questions and code contributions belong with the original project. Catalog corrections can be proposed separately.