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scverse

@scverse

Selected public research from this GitHub organization.

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A research description has not been supplied. Follow the source for the original project documentation.

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github · 2026-09-22

Sources & versions

scverse/scanpy
Reference role
primary
Last successful public check
2026-09-22T08:37:54.212Z
Latest public check attempt
2026-09-22T08:37:54.212Z · ok
GitHub metrics
Stars 2,563 · checked · latest attempt 2026-09-22T08:37:54.212Z (ok)
Forks 780 · checked · latest attempt 2026-09-22T08:37:54.212Z (ok)
Latest default-branch commit

0d5fd16234865619d2f5097d33fc4281900a2bc2
Observed 2026-09-22T08:37:54.212Z
Source activity check
fresh · last successful check 2026-09-22T08:37:54.212Z · latest attempt 2026-09-22T08:37:54.212Z (ok)
Source status
Active at last observation
License
BSD-3-Clause
Fixed commit
0d5fd16234865619d2f5097d33fc4281900a2bc2
Download source at this commit

Default-branch activity is separate from the fixed reference above. Source terms apply. A fixed commit identifies content; it does not establish scientific validity.

scverse/anndata
Reference role
primary
Last successful public check
2026-09-22T08:37:54.533Z
Latest public check attempt
2026-09-22T08:37:54.533Z · ok
GitHub metrics
Stars 773 · checked · latest attempt 2026-09-22T08:37:54.533Z (ok)
Forks 209 · checked · latest attempt 2026-09-22T08:37:54.533Z (ok)
Latest default-branch commit

13b1ae164e7c8fdf69e1d195a49bc7c3774424d9
Observed 2026-09-22T08:37:54.533Z
Source activity check
fresh · last successful check 2026-09-22T08:37:54.533Z · latest attempt 2026-09-22T08:37:54.533Z (ok)
Source status
Active at last observation
License
BSD-3-Clause
Fixed commit
13b1ae164e7c8fdf69e1d195a49bc7c3774424d9
Download source at this commit

Default-branch activity is separate from the fixed reference above. Source terms apply. A fixed commit identifies content; it does not establish scientific validity.

scverse/mudata
Reference role
primary
Last successful public check
2026-09-22T08:37:57.524Z
Latest public check attempt
2026-09-22T08:37:57.524Z · ok
GitHub metrics
Stars 134 · checked · latest attempt 2026-09-22T08:37:57.524Z (ok)
Forks 24 · checked · latest attempt 2026-09-22T08:37:57.524Z (ok)
Latest default-branch commit

2c529f0f5c2f51986269fdb1e426a5fb9f579826
Observed 2026-09-22T08:37:57.524Z
Source activity check
fresh · last successful check 2026-09-22T08:37:57.524Z · latest attempt 2026-09-22T08:37:57.524Z (ok)
Source status
Active at last observation
License
BSD-3-Clause
Fixed commit
2c529f0f5c2f51986269fdb1e426a5fb9f579826
Download source at this commit

Default-branch activity is separate from the fixed reference above. Source terms apply. A fixed commit identifies content; it does not establish scientific validity.

Related research

BSD-3-Clause

Tool

AnnData research software

Organize, subset and save a data matrix together with aligned observation and variable annotations using AnnData.

Added Catalog updated unknown
GitHub · scverse/anndataStars 773Forks 209
Computer and information sciences
BSD-3-Clause

Tool

MuData research software

Multimodal Data (.h5mu) implementation for Python

Added Change observed by
GitHub · scverse/mudataStars 134Forks 24
Computer and information sciences
BSD-3-Clause

Tool

Scanpy research software

Single-cell analysis in Python. Scales to >100M cells.

Added Change observed by
GitHub · scverse/scanpyStars 2.6KForks 780
Computer and information sciences
AnnDataCommunity indexed

AnnData provides a Python data container for annotated matrices, keeping observations, variables and associated metadata together for downstream research workflows.

Research discipline Computer and information sciencesReusable outputs 1
Computer and information sciencesscverse/anndata
Added Catalog updated unknown
GitHub · scverse/anndataStars 773Forks 209
MuDataCommunity indexed

Python data structures and .h5mu I/O for multimodal annotated datasets, organizing individual modalities as AnnData objects.

Research discipline Computer and information sciencesReusable outputs 1
Computer and information sciencesscverse/mudata
Added Change observed by
GitHub · scverse/mudataStars 134Forks 24
ScanpyCommunity indexed

Single-cell analysis software. This catalog connects the Scanpy implementation with the AnnData data model that its README identifies as jointly developed infrastructure.

Research discipline Computer and information sciences · Biological sciencesReusable outputs 2
Computer and information sciencesscverse/scanpy
Added Change observed by
GitHub · scverse/scanpyStars 2.6KForks 780

Claims & evidence

No maintainer acknowledgement or scientific validation is recorded for this entry. Community indexing only describes its inclusion in this catalog.

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